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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914472.1_cds_XP_016464452.1_57488
CDS Infomation

[gene=LOC107787403] [db_xref=GeneID:107787403] [protein=serine/threonine-protein phosphatase 5-like isoform X1] [protein_id=XP_016464452.1] [location=join(13478..13587,13684..13759,15393..15543,16503..16715,17844..17952,18037..18154,19796..19943,20431..20679,21214..21339,21470..21570,22400..22474,22639..22698)] [gbkey=CDS]
Sequence

ATGCGGTGTACTGGGCTAATCGTGCGTTTGCTCATACCAAATTGGAGGAATATGGCAGCG
CAATACAGGATGCAACTAGGGCTATTGAAACTGACCCTAAATATTCAAAGGGTTATTATA
GGCGAGGGGCTGCATATTTGGCAATGGGGAAGTTCAAAGATGCGCTCAAGGATTTTCAAC
AGGTTGGTCAAGAAGTTATGTCCAAACGACCCAGATGCTACCAAGAAATTGAAGGAATGT
GAAAAGGCTGTCATGAAGCTAAAATTTGAAGAAGCTATTTCTGTCCCAGAATCTCAGAGA
TGTTCAGTAGCTGATTCTATTGATTATCACACCGTAGGGTCTGGCCCTGGCTCATCATAT
GTTTCCACCAAAGTAACTGCTGTATCAGCGGCAGCAGCACTAATGGCAGTACTTGTGGTA
TATATGGGGACTAAGGCAGCCACAGCAGTCACAGCAGTGGCAGCAGCAGCTTTGGCAGCC
TTATTGATGGTCTTGCTAACATTTCGGTGGGCTCGCTTCAATGATACCAAGAGTCGAACA
CTTGAATTAGAAGTGGAGCCTCAGTATACCGGTGCAAGGATAGAGGGAGATGTTGTAACA
TTAGATTTTGTAAAGAAGATGCTGGATGACTTCAAAAACCAGAAGAATTTACATAAAAGA
TATGCCTACCAAGTAGTTCTGCAAACAAGAGACATGCTGCGAGCATTGCCCTCCCTCGTG
GATATCGTTGTTCCTGAAGGGAAACACTTCACTGTATGTGGTGATGTACATGGTCAGTTT
TATGACCTTCTAAATATTTTCGAGCTCAATGGGCTTCCATCTGAAGACAATCCGTATCTG
TTCAATGGTGACTTTGTTGATAGAGGGTCTTTCTCTCTAGAGGTCATATTGACATTATTT
GCCTTCAAGTGCATGTGTCCATCAGCTATATACCTTGCGAGAGGAAATCATGAAAGCAAG
AGCATGAACAAGATATATGGGTTTGAGGGCGAGGTCAGATCCAAGTTAAGTGAAACCTTT
GTGGAACTCTTTGCAGAAGTGTTCTGTTGCTTGCCTTTGGCTCATGTCATAAATGGGAAA
GTCTTTGTAGTTCATGGAGGCCTTTTCAGTGTTGATGGTGTGAAACTTTCTGATATTAGA
GCAATCGATCGGTTTTGTGAGCCCCCTGAGGAGGGGTTAATGTGTGAATTGCTATGGAGT
GATCCACAACCTCAGCCTGGTAGAGGACCTAGTAAACGAGGTGTTGGTCTTTCTTTCGGG
GCGGATATAACTAAAAGATTCTTGCAGGAAAATAATTTAGATTTAGTGGTCCGATCTCAT
GAAGTGAAGGATGAAGGTTATGAGATTGAGCATGACGGCAAGCTCATCACGGTGTTTTCT
GCTCCAAATTACTGTGACCAGATGGGTAACAAGGGTGCTTTTATACGGTTTGAGGCTCCC
GATATGAAGCCAAACATTGTGACATTTTCAGCAGTGCCACATCCTGATGTCAAGCCGATG
GCATATGCGAACAACTTCCTTAGAATGTTCTCTTAA

Peptide Sequence

PEP ID

XP_016464452.1
PEP Infomation

PREDICTED: serine/threonine-protein phosphatase 5-like isoform X1 [Nicotiana tabacum]
Sequence

MRCTGLIVRLLIPNWRNMAAQYRMQLGLLKLTLNIQRVIIGEGLHIWQWGSSKMRSRIFN
RLVKKLCPNDPDATKKLKECEKAVMKLKFEEAISVPESQRCSVADSIDYHTVGSGPGSSY
VSTKVTAVSAAAALMAVLVVYMGTKAATAVTAVAAAALAALLMVLLTFRWARFNDTKSRT
LELEVEPQYTGARIEGDVVTLDFVKKMLDDFKNQKNLHKRYAYQVVLQTRDMLRALPSLV
DIVVPEGKHFTVCGDVHGQFYDLLNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLF
AFKCMCPSAIYLARGNHESKSMNKIYGFEGEVRSKLSETFVELFAEVFCCLPLAHVINGK
VFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEGLMCELLWSDPQPQPGRGPSKRGVGLSFG
ADITKRFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAP
DMKPNIVTFSAVPHPDVKPMAYANNFLRMFS

Transcript Sequence

Gene sequence data has not been registered.